The Diagnosis and Incidence of Allergic Fungal Sinusitis
JENS U. PONIKAU, MD; DAVID A. SHERRIS, MD; EUGENE B. KERN, MD; HENRY A. HOMBURGER, MD;
EVANGELOS FRIGAS, MD; THOMAS A. GAFFEY, MD; AND GLENN D. ROBERTS, PHD
Objective: To reevaluate the current criteria for diagnosing
allergic fungal sinusitis (AFS) and determine the
incidence of AFS in patients with chronic rhinosinusitis
(CRS).
Methods: This prospective study evaluated the incidence
of AFS in 210 consecutive patients with CRS with or
without polyposis, of whom 101 were treated surgically.
Collecting and culturing fungi from nasal mucus require
special handling, and novel methods are described. Surgical
specimen handling emphasizes histologic examination
to visualize fungi and eosinophils in the mucin. The value
of allergy testing in the diagnosis of AFS is examined.
Results: Fungal cultures of nasal secretions were positive
in 202 (96%) of 210 consecutive CRS patients. Allergic
mucin was found in 97 (96%) of 101 consecutive surgical
cases of CRS. Allergic fungal sinusitis was diagnosed in 94 (93%) of 101 consecutive surgical cases with CRS, based
on histopathologic findings and culture results. Immunoglobulin
E–mediated hypersensitivity to fungal allergens
was not evident in the majority of AFS patients.
Conclusion: The data presented indicate that the diagnostic
criteria for AFS are present in the majority of patients
with CRS with or without polyposis. Since the presence
of eosinophils in the allergic mucin, and not a type I
hypersensitivity, is likely the common denominator in the
pathophysiology of AFS, we propose a change in terminology
from AFS to eosinophilic fungal rhinosinusitis.
Mayo Clin Proc. 1999;74:877-884
AFS = allergic fungal sinusitis; CRS = chronic rhinosinusitis;
CT = computed tomographic; IgE = immunoglobulin E;
RAST = radioallergosorbent test
In 1983, Katzenstein et al1 described allergic Aspergillus
sinusitis as a newly recognized form of sinusitis. The
diagnosis was made based on the histologic triad of (1)
clumps or sheets of necrotic eosinophils; (2) Charcot-Leyden
crystals (from degraded eosinophils); and (3)
noninvasive fungal hyphae with morphology consistent
with Aspergillus species within the nasal mucus. In 1989,
Robson et al2 introduced the term allergic fungal sinusitis
(AFS) because they identified a number of fungi thought to
cause the same disorder. In 1990, Ence et al3 identified 5
different organisms responsible for AFS. Cody et al4 reported
that Aspergillus species were responsible for only
about 15% of cases of AFS in a large retrospective study.
The incidence of AFS in cases of chronic rhinosinusitis
(CRS) treated surgically has been approximately 6% to 7%.1,4 Nasal polyps were found in 75% and asthma was
found in 65% of the AFS cases described.5
Based on the clinical findings in 16 patients, Bent
and Kuhn6 proposed 5 criteria for the diagnosis of AFS:
(1) nasal polyposis; (2) allergic mucin; (3) computed
tomographic (CT) scan findings consistent with CRS; (4)
positive fungal histology or culture; and (5) type I hypersensitivity
(atopy) diagnosed by history, positive skin test,
or serology. Recently, deShazo and Swain7 described 7
patients with AFS in whom they applied similar diagnostic
criteria, with the exception of atopy. The reason they excluded
atopy as a diagnostic criterion for AFS was their
review of the literature in which they found that only two
thirds of patients tested had a positive skin test result to the
fungi cultured. In addition, 1 of their 7 patients with the
histologic diagnosis of AFS had no evidence of atopy.
Cody et al4 also stated that the sensitivity and specificity of
total and specific immunoglobulin E (IgE) and immunoglobulin
G in AFS are unknown, and the usefulness of
those tests in determining prognosis or efficiency of treatment
is unknown. Both type I and type III hypersensitivity
reactions (Gell and Coombs classification) have been postulated
to play an instrumental role in the development of
AFS. This hypothesis arose from the correlation of AFS
with the pulmonary disorder termed allergic bronchopulmonary
aspergillosis. Some of the reported cases of AFS
demonstrated an elevated level of IgE antibodies specific
for fungi. No other evidence, beyond speculation, exists that IgE-mediated type I hypersensitivity is involved in the
pathophysiology of AFS. Thus, the unrefuted diagnostic
criteria for AFS are (1) CRS; (2) the presence of allergic
mucin (clusters of eosinophils and their by-products, eg,
Charcot-Leyden crystals and major basic protein); and (3)
the presence of fungal organisms within that mucin, confirmed
by histology, culture, or both.4,7,8
There remains a group of patients with “AFS-like” disease
described by previous authors; these cases do not fit
the criteria for AFS in that fungi are not found on culture or
histology despite the presence of allergic mucin.4,8,9 We
pose the question: Were those cases caused by fungus that
was simply missed in the diagnostic process, or is an AFSlike
syndrome a different clinical condition?
Most authors agree that AFS is an underdiagnosed entity
and that only an increased awareness among physicians
to look for fungal involvement will increase the accuracy of
diagnosing AFS. Unfortunately, previous diagnostic methods
seem to lack sensitivity. For example, in the past, even
when fungal hyphae were clearly identified in histologic
specimens, only 60% of the cultures were positive for
fungi.4,5 Some investigators approached this problem with
other diagnostic methods directed at identifying the fungi,
such as in situ hybridization.10 Although in situ hybridization
appears to be an intriguing and precise method to
determine the species of organisms seen histologically, it
seems to be impractical for screening. Each DNA probe is
specific only for the complementary recombinant RNA of
the preselected species. A complete catalog of DNA probes
does not exist, and the method is both cumbersome and
expensive.
Radiologically, patients with AFS frequently have areas
of high attenuation within soft tissue masses of the affected
sinuses on noncontrast CT scan.11-13 These areas are void on
T2-weighted magnetic resonance imaging. The hypodense
areas on CT scan seem to correspond well with the surgically
proven areas of allergic mucin. Yet, as we know
from head and neck studies, CT scans are insensitive to
subtle structural differences smaller than 1 cm (eg, lymph
nodes). Thus, the CT sinus examination may not be sensitive
or specific enough to identify small areas of allergic
mucin.
In studying CRS and AFS, we set out to improve the
sensitivity of standard tests used to diagnose AFS, namely,
mucus sample collection, nasal secretion culture, surgical
specimen handling, and histologic evaluation of surgical
specimens. The role of IgE-mediated hypersensitivity was
prospectively evaluated with various standard methods.
Applying the improved test methods in a prospective, consecutive
fashion to all CRS patients with or without nasal
polyposis allowed us to better estimate the incidence of
AFS in the general CRS population.
METHODS AND MATERIALS
Collection and Culture Technique
Awareness that fungi are colonizing the mucus
prompted development of a simple noninvasive procedure
to obtain as much mucus as possible for testing.
Two puffs of phenylephrine hydrochloride 1% are sprayed
into each nostril to produce vasoconstriction. The spray
also increases the nasal lumen and consequently the
yield from nasal lavage. After approximately 2 minutes
each nostril is flushed with 20 mL of sterile saline using
a sterile syringe with a sterile curved blunt needle (Figure
1, A). The patient takes a deep inspiratory breath
and holds it before the injection of saline. The patient
then forcefully exhales through the nose during the
flushing. The return is collected in a sterile pan (Figure
1, B).
The collected fluid is placed into centrifuge tubes and
sent directly to the mycology laboratory where the specimen
is processed under a laminar flow hood to prevent
contamination. One vial (10 mL) of sterile dithiothreitol is
diluted with 90 mL of sterile water. The collected specimen
is suspended with an equal volume of diluted dithiothreitol
and vortexed for 30 seconds. The mixture is allowed to
stand at room temperature for 15 minutes while the
dithiothreitol breaks apart the disulfide bonds, thus liquefying
the mucus. The mixture is then centrifuged at 3000g in
a 50-mL tube for 10 minutes. The supernatant is discarded,
and the sediment is vortexed for 30 seconds. One-half
milliliter of the prepared sediment is inoculated onto an
inhibitory mold agar plate containing chloramphenicol
(125 µg/mL); inhibitory mold agar containing ciprofloxacin
(5 µg/mL); brain-heart infusion agar containing
5% sheep blood, gentamicin (5 µg/mL), and chloramphenicol
(15 µg/mL); and brain-heart infusion agar containing
5% chloramphenicol (15 µg/mL), gentamicin (5µg/mL), and cycloheximide (5 mg/mL). The plates are
incubated at 30°C and allowed to grow for 30 days. The
plates are examined at 2-day intervals, and all cultures are
identified.
Patients
Two hundred ten consecutive patients with the clinical
diagnosis of CRS with or without nasal polyposis had
lavage specimens collected for culture. The clinical diagnosis
of CRS was established with a history of recurrent
upper respiratory tract infections lasting longer than 3
months and inflammatory mucosal thickening seen on
endoscopic examination and confirmed with a coronal CT
scan.14 Fourteen volunteers with no history of nasal or
paranasal sinus disease, with no symptoms of inhalant
allergy, and with normal-appearing mucosa confirmed by
nasal endoscopy served as controls.

Figure 1. A, Saline is instilled forcefully into the patient’s nostril. B, The patient exhales saline and mucus into
a
sterile pan.
Collection of Surgical Specimens and
Histologic Examination
The principle of maximum mucus preservation was adhered
to during the acquisition of surgical specimens. This
enabled the assigned pathologist to find allergic mucin and
fungal elements within the mucus. All the surgical procedures
were performed without a power microdébrider to
ensure maximal mucin collection. In addition, use of suction
devices was limited. The mucus was manually removed
together with inflamed tissue and placed on a saline-moistened nonstick sheet (Figure 2). Specimens were
not placed directly on a surgical towel or on gauze because
these carriers absorb a large amount of the mucus
(Figure 3). Frozen sections were not performed except to
exclude inverted papilloma, malignancy, or other disorders.
The specimen was then processed routinely. Multiple
serial sections of different specimens from each patient
were stained with hematoxylin and eosin and with
Gomori methenamine silver. The pathologists were alerted
to pay special attention to the mucin. Of the 210 CRS
patients from whom specimens were collected, 101 underwent
sinus surgery and thus provided material for histologic
analysis.
Immunologic Work-up
A total blood IgE level was determined in 179 of the 210
patients who had cultures done. In all 179, a specially
designed skin test was used to screen for IgE-mediated
hypersensitivity. A battery of 18 commercially available
fungal extracts was used to perform a skin-prick test and an intradermal test (dilution 1:100). A 48-hour reading was
done looking for delayed type IV hypersensitivity.
 |
|
 |
| Figure 2. A nonstick sheet protects the mucus on the removed
polypoid tissue from being absorbed. |
|
Figure 3. A nasal polyp is placed directly on a towel. Note the
large amount of mucus that has been absorbed by the towel. |
Serum samples from 95 of the 179 skin-tested patients
were screened with the radioallergosorbent test (RAST)
method using 23 mold allergen assays. Total and fungusspecific
IgE blood levels were determined and the fungusspecific
skin tests were performed in the 14 normal subjects
serving as the control group.
RESULTS
The novel collection and culturing method resulted in cultures
positive for fungus in 202 (96%) of 210 consecutive
patients with CRS. A total of 541 positive cultures grew,
with an average of 2.7 organisms per patient and a maximum
of 8 different organisms per patient. A total of 40
different genera of fungi were identified (Table 1). Thirtyone
species have not been associated with or described in
AFS before to our knowledge. Interestingly, the control
group of normal, healthy volunteers was 100% culture
positive for fungi. Thirty-one fungus-positive cultures
grew, with an average of 2.3 different organisms per volunteer,
and a maximum of 4 different organisms per subject.
Eight genera were identified (Table 2). The organisms
grown from the controls were not markedly different than
those from the CRS patients.
Of the 101 surgical cases, fungal elements (hyphae,
destroyed hyphae, conidiae, and spores) were found in 82
histologic specimens (81%) (Figure 4, A). The allergic mucin,
containing clusters (or sheets) of degenerating eosinophils
and their by-products (Figure 4, B), was found in 97
(96%) of 101 consecutive surgical cases. Interestingly, in
the remaining 4 cases in which the allergic mucin was
absent, the eosinophils were also almost completely absent
in the harvested nasal mucosa and polyps. The possibility
exists that preoperative steroids given to these patients
explain the absence of eosinophils. Two of these patients also had an acute bacterial onset with neutrophil
predominance.
Tissue from 4 healthy controls had absent tissue eosinophilia,
which confirms similar findings by other authors.15
Sometimes the mucus filled the entire sinus, and sometimes
there were only small pockets of thick mucin between
the polypoid material or only a thin layer coating the
inflamed mucosa. High-attenuation areas, reflecting the allergic mucin precisely where we have found it during
surgery, were noted on CT scan in most cases of CRS
(Figure 5). Because of the small size of the mucus pockets,
we felt that the histologic examination was more sensitive
and specific than the CT scans.
Overall, the diagnostic criteria for AFS were met in
94 (93%) of 101 patients with CRS. All patients had
a broad spectrum of inflammatory mucosal thickening ranging from minimal polypoid changes to massive
polyposis.
In 59 (33%) of 179 patients evaluated, the total IgE level
was higher than 128 KU/L (the second SD); in 61 (34%) of
179 patients, it was between 41 and 128 KU/L (the first and
second SDs), and in 43 (24%) of 179 patients, it was
between 13.2 and 41 KU/L (the mean value for the atopic
control population and the first SD, respectively). Interestingly,
16 (9%) of 179 patients had a total IgE level of less
than the normal value, and 2 of these patients’ values were
less than the laboratory’s detection level (2 KU/L). Clear
evidence of allergic mucin and fungi was present (on histology
as well as culture) in each of these cases.
The specific IgE levels in the blood were elevated for at
least 1 fungal species in 27 (28%) of 95 patients. In 12
(44%) of 27 patients with an elevated specific IgE level, the
total IgE level was not higher than 128 KU/L. The lowest
total IgE level we have noted in a patient with elevated
specific IgE for multiple molds was about 30 KU/L.

Figure 4. A, Scattered fungal elements (hyphae) within the eosinophilic (allergic) mucin (Gomori methenamine silver stain,
original magnification x200). B, Serial section from A shows eosinophilic mucin with typical sheets and clusters of
degenerating eosinophils (hematoxylin and eosin stain, original magnification x200).
Allergy skin tests by the skin-prick and intradermal
methods showed similar results. With the skin-prick
method, 45 (25%) of 179 patients had a positive reaction to
at least 1 fungal allergen. An additional 30 patients (17%)
who had negative skin-prick test results were positive to at
least 1 species by the intradermal method. A delayed type
IV hypersensitivity reaction was noted in 9 (5%) of 179
patients.

Figure 5. Coronal computed tomographic scans from 2 different patients with chronic rhinosinusitis showing
moderate inflammatory thickening and typical small areas of high attenuation (arrows) correlating with the
intraoperative finding of eosinophilic (allergic) mucin.
The immunologic evaluation of the control group resulted
in elevated total IgE levels in 4 (29%) of 14 controls. Three
of these 4 volunteers had an elevated specific IgE level and a
positive skin-prick test result to at least 1 fungal allergen. In
2 of these 3 volunteers the organisms growing on culture
correlated with the elevated specific IgE level and the positive
skin test finding. Overall, the differences in the specific
and total IgE values were not significant between the patient
group and the control group.
DISCUSSION
With fewer than 250 cases reported in the literature to date,
AFS has been considered rare. With heightened awareness
of the disease, an increased number of reports have been
published more recently.4,5,16 Suggestions regarding the criteria
for clinical diagnosis, pathophysiologic mechanisms involved,
and treatment regimens have appeared in the literature.
3,4,6,9,10,16 The diagnostic criteria of AFS include (1) CRS
(confirmed by CT scan); (2) the presence of allergic mucin
(predominantly eosinophils and their degenerated by-products);
and (3) the presence of fungal organisms within that
mucin confirmed by histology or culture. We believe this is
the first prospective report to demonstrate, using these diagnostic
criteria, the incidence of AFS in CRS patients. The
93% incidence of AFS in CRS is considerably higher than the incidence reported in previous retrospective reviews.1,4,5
Undoubtedly, the biggest problem facing previous investigators
has been the inability to demonstrate fungal organisms
in the nasal mucin. Naturally, most clinicians concluded
from a negative culture or a negative pathology report that
fungi were not present in the mucus, and therefore the disease
could not be AFS. They probably ignored the possibility
that the methods used to collect mucus were inadequate to
identify the fungi. Because fungi colonize within the nasal
mucus, the more mucus that is collected for culture and
histologic examination, the greater the chance of a positive
fungal yield. Thus, we developed a novel method to collect
the mucus in an office setting. The forceful injection of
physiologic saline into the nostril of the patient followed by
forceful exhalation loosens the mucus and increases the
amount of mucus collected. During surgery, the mucus can
be removed manually with forceps, directly with a suction
trap, or by instilling saline in the nose and/or the sinuses and
capturing it within a suction trap.

Figure 6. A, Fungi are entrapped in the mucus during incubation if a mucolytic agent is not used in the culturing process. B, Fungal
elements are released from the mucus by a mucolytic agent and contact the growth medium.
During the culturing of nasal secretions, fungi must be
extracted from the mucus before being placed on the
growth medium (Figure 6, A). We use dithiothreitol, a
mucolytic agent, to liquefy the mucus. The fungi are separated
from the mucus by centrifugation and placed on the
growth media (Figure 6, B). During the incubation period
no single temperature setting seems to be perfectly suited
for all fungal species; however, 30°C is optimal for most
fungal organisms. A minimum incubation time of 30 days
seems necessary for complete recovery.
The maxim “more is better” also applies to collection of
surgical specimens for histologic evaluation. Suction devices
and power microdébriders decrease the amount of
recovered mucus. The use of suction traps should always
be considered. The handling of specimens sent to the pathologist
is also crucial. Placing specimens on absorbent
material (eg, towels, cotton sheets) results in a significant
reduction of collected mucus, and use of nonabsorbent
sheets is preferable. Technicians processing the specimens
are instructed to preserve the attached mucus because it is
essential for histologic diagnosis. Multiple sections from
different areas of the nose and paranasal cavities must be
prepared since fungi are frequently scattered. The sections
must be routinely stained with Gomori methenamine silver
to identify the fungi and hematoxylin and eosin to identify
the eosinophils in the mucus.
Pathologists must be informed about the nature of the
disease so they can focus their study on the mucus. They
must be aware of the different morphologic features, sizes,
and shapes of the common fungi. In addition, the pathologist
needs to understand that the eosinophils may present in
various stages of cell degeneration, depending on the different
stages of the disease. Sometimes the eosinophils in the clusters are still intact with few Charcot-Leyden crystals
present. At the other end of the spectrum, only the
remnants of eosinophils are found in the form of cellular
debris and crystals. The crystals are a product of degenerating
eosinophils and common in other diseases with eosinophil
involvement. The presence of Charcot-Leyden crystals
alone is not specific for AFS and therefore should not be
used as a diagnostic criterion. All that the presence of
crystals implies is that eosinophils have died. Other markers
more specific for eosinophil degranulation (eg, major
basic protein) may be more useful histologic markers, although
this concept needs further study.
The histologic markers of CRS are the striking numbers
of eosinophils in CRS, in contrast to the near absence of
eosinophils in healthy controls.17 Our findings demonstrate
that eosinophils, when present in high numbers in the tissue
in CRS, are also invariably present in the mucus, mostly in
the form of cell clusters. The conclusion we draw from this
observation is that the eosinophils are only in transit
through the tissue toward the mucus. Our observation is
that eosinophils actually migrate intact through the epithelium
and degranulate within the mucus. Hypothesizing that
the eosinophils are more than role players in a general
inflammatory response, we think that the eosinophils play
an immunologic defensive role in CRS, and their target is
located in the mucus. In other words, the fungal organisms
in the mucus could be the target for the eosinophils, but this
hypothesis needs further validation.
Confusion exists about the role of IgE-mediated allergy in
AFS. Some investigators insist that an IgE-mediated type I
hypersensitivity to fungi plays a central role in the pathogenesis
of AFS.3,6,10,16,18 To support their contention, they found a
history of atopy or an elevated total serum IgE level in their
cases. In addition, they occasionally noted elevated fungus-specific IgE levels that correlated with the species found in
the positive fungal cultures from the nasal mucus.
Further evidence supporting the type I hypersensitivity
theory was the postoperative finding of a decrease of total
and specific IgE levels after surgery in some cases, probably
as a result of a reduction of the fungal antigenic load.
Consequently, Mabry et al19 championed a postoperative
immunotherapy approach to AFS. They observed that
those AFS patients responding to immunotherapy had less
need for systemic steroids. In a follow-up article, Mabry
and Mabry20 reported that the mold-specific IgE levels do
not decrease in AFS patients responding well to immunotherapy,
with normal-appearing nasal mucosa. Thus, the
effect of the immunotherapy is unlikely to be IgE mediated.
Our IgE data and other observations seem to challenge
the thinking that IgE might drive the inflammatory changes
seen in AFS. For example, we found elevated total IgE
levels in fewer than 33% of our patients diagnosed as
having AFS. Only 42% of the patients had a detectable type
I hypersensitivity by skin test, and only 30% had an elevated
fungus-specific IgE level by RAST. Thus, more than
half (58%) of our patients showed no evidence of increased
IgE levels to fungi. While more than half of our patients
were not allergic to fungi, the clinical and histopathologic
findings were the same as in those with allergy to fungi.
The possibility exists that local IgE production in the nasal
mucosa could explain the fact that 58% of our patients with
AFS showed no evidence of elevated blood IgE levels to
fungi.21 Even with an elevated local IgE production, an
IgE-mediated type I hypersensitivity reaction to fungi requires
mast cell degranulation. But mast cells are not increased
in the nasal mucosal tissue or in the nasal mucus
itself in CRS or AFS patients.22 Another compelling piece
of evidence against the type I hypersensitivity mechanism in AFS is that antihistamines neither relieve nor reverse patients’
symptoms. Finally, 2 subjects from our control group
who had elevated IgE levels to fungi, which were cultured
from their nasal mucus, had no evidence of chronic nasal
mucosal inflammation or symptoms of AFS or CRS.
The findings of fungi in the mucus and elevated specific
IgE level to fungi without mucosal inflammation are exactly
what occurs in patients with rhinitis caused by allergic
reaction to molds. It is obvious that some patients have both
AFS and allergic rhinitis (especially to molds) as comorbid
diseases. Both share major symptoms, such as nasal obstruction
and nasal congestion, and patients with active
allergic rhinitis and AFS may be the most symptomatic.
Our data reveal that many different fungi colonize
everyone’s nasal secretions. Some people even have allergic
rhinitis to molds with elevated specific IgE levels to
these fungi but do not have nasal mucosal inflammatory
changes with AFS-associated tissue damage. If IgE mediation
is the primary pathophysiologic mechanism, how can
these patients be explained?
We view the increased fungus-specific IgE levels found
in some AFS patients merely as a recognition by the immune
system of fungi and not the cause of disease. Since
AFS clearly exists independently from elevated fungusspecific
or total IgE levels or positive skin test results,
atopy should not be a diagnostic criterion.
For all the above reasons, we conclude that a role for IgE
in either the etiology or the pathophysiology of AFS is
unlikely. The mere presence of eosinophils in the mucus
does not necessarily mean an allergic (IgE-mediated) origin
alone. In fact, the clinical finding that eosinophil migration
and influx occur independently from IgE was recently
demonstrated in a murine model.23,24 The term allergic
mucin is thus a misnomer and is confusing. We prefer the
term eosinophilic mucin, since it is clear and descriptive
and does not imply an IgE-mediated type I hypersensitivity.
Consequently, the term allergic fungal sinusitis is also
inaccurate for this disease and should be altered. We propose
the term eosinophilic fungal rhinosinusitis to reflect
the striking role of the eosinophils in this disease, which we
hypothesize are triggered by the extramucosal fungi.
ACKNOWLEDGMENT
We thank Gregory L. Jacob and Carlyle D. Horstmeier for
their help with the laboratory evaluation, Louise K.
McCready for her help with the skin testing, as well as
James D. Postier for the artwork.
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